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Providing researchers single cell sequencing with unprecedented scale and ease

About Parse

Evercode™ FFPE

Whole Transcriptome Single Cell Profiling from FFPE Tissue

Parse Biosciences’ Evercode chemistry unlocks whole transcriptome characterization at single cell resolution from formalin-fixed, paraffin-embedded (FFPE) samples, revealing biology previously beyond reach.

Redefining What’s Possible with FFPE

FFPE preservation has long been a preferred method to store and safeguard invaluable tissue collections, but studying these samples at single cell resolution meant settling for limited or partial data. Probe-based methods restrict analysis to predefined gene sets, leaving part of each cell’s biology unseen.

Evercode changes that.

By capturing the full transcriptome from FFPE tissue, Parse enables researchers to explore every gene expressed in every cell. This reveals RNA types, cell states, and genes that were previously out of view.

This breakthrough brings whole transcriptome single cell discovery to this widely used preservation method.

Single cell resolution from FFPE mouse liver tissue

UMAP showing distinct cell populations captured from approximately 22,000 nuclei (20,000 reads per cell) using Evercode chemistry. Data demonstrates the ability to achieve clear, whole transcriptome single cell resolution from FFPE-preserved tissue.

See the Complete Cellular Landscape

With Evercode FFPE, researchers can now see the complete molecular landscape of each cell without the constraints of predefined probe panels. Capture isoforms, SNPs, and non-coding RNAs that reveal deeper layers of regulation, variation, and cell state.

Parse’s whole transcriptome approach brings modern single cell discovery to the tissues that have shaped decades of research.

High quality data.
Scalable without compromise.

Evercode FFPE delivers the same scalability and data quality researchers expect from Parse. Profile thousands to millions of cells across hundreds of samples with confidence and consistency.

By minimizing background noise and ensuring clear cell identification, Evercode generates data you can trust for clustering, differential expression, and downstream analysis.

From translational oncology to clinical discovery, Parse empowers scientists to extract new biological insights from irreplaceable archived tissue collections.

Single cell resolution from FFPE mouse kidney tissue

UMAP showing distinct cell populations captured from approximately 12,500 nuclei (20,000 reads per cell) using Evercode chemistry. Demonstration data illustrate high-quality transcript capture and clustering from preserved tissue.

We're your partners in single cell

Reach out for more information on the details of our FFPE product or for help planning your next experiment.

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